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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pdgfc, platelet-derived growth factor, C polypeptide
Sequence ID:NM_019971
Entrez Gene ID:54635
Ensembl ID:ENSMUSG00000028019

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 E3|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 81037239 - 81214034

NM_019971 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
111398084033780841475
114013358094532680945521
133615168097873780978917
151717248100815681008363
172519428101296581013182
194335128101638381017952

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4008749Full LengthBC037696platelet-derived growth factor, C polypeptide
3487609IncompleteBC006027platelet-derived growth factor, C polypeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064355  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019971 NP_064355 Q8CI19 CUB

Related Sequences

 
mRNAGenPeptSwissProt
AF117608 AAF22516 Q8CI19
AF286725 AAF91483 Q8CI19
BC006027 AAH06027 Q8CI19
BC037696 AAH37696 Q8CI19
AF266467 AAK58566 Q8CI19
AK033734 BAC28455 Q8CI19
AK042767 BAC31358 Q8CI19
AK052947 BAC35216 Q8CI19

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pdgfc NP_064355 R.norvegicus Pdgfc 79429   NP_112607 97
H.sapiens PDGFC 56034 Gene Info NP_057289 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)