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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ubc, ubiquitin C
Sequence ID:NM_019639
Entrez Gene ID:22190
Ensembl ID:ENSMUSG00000008348

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G1.1|5 64.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 125385976 - 125389754

NM_019639 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
172316125866334125868633
23172424125870279125870386

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3500023Full LengthBC006680ubiquitin C
5123918Full LengthBC021837ubiquitin C

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019639 NP_062613 P0CG50 ubiquitin
Trigger_N

Related Sequences

 
mRNAGenPeptSwissProt
S40697 AAB22649  
BC006680 AAH06680 Q922Z8
BC008661 AAH08661 Q922B0
BC021837 AAH21837 Q8VC46
BC025894 AAH25894 Q8R0Z9
BC036303 AAH36303 Q8R0Z9
BC094012 AAH94012 Q8R0Z9
EF580991 ABQ52426 A5JUZ1
D50527 BAA09096 P0CG50
AK010964 BAB27296 Q8R0Z9
AK168448 BAE40351 Q3TH47

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ubc NP_062613 H.sapiens UBC 7316 Gene Info NP_066289 100
A.gambiae AgaP_AGAP002599 1273370   XP_312337 100
R.norvegicus Ubc 50522   NP_059010 99
D.melanogaster Ubi-p63E 38456   NP_995994 99
C.elegans ubq-1 175840   NP_741157 98
A.thaliana UBQ8 820137   NP_566357 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)