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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hnf4g, hepatocyte nuclear factor 4, gamma
Sequence ID:NM_013920
Entrez Gene ID:30942

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3|3 A

Chromosomal Position (from UCSC)

Chromosomal Position:3: 3508101 - 3657374

NM_013920 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
130335080293508331
30447536380583638229
47657036412223641316
57167736429633643069
67883336445353644690
83492136480333648120
922107436512713651423
1075131136515473651783
1312143436528363652958
1435418036570543659799

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130034Full LengthBC125519hepatocyte nuclear factor 4, gamma

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038948  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013920 NP_038948   Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
BC125519 AAI25520 Q059V1
AK143816 BAE25549 Q3UP48
AJ242626 CAB43724 Q9WUU6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hnf4g NP_038948 R.norvegicus Hnf4g 365744   NP_001102409 98
H.sapiens HNF4G 3174 Gene Info NP_004124 96
C.elegans nhr-64 171884   NP_001021042 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)