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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Psen2, presenilin 2
Sequence ID:NM_011183
NM_001128605
Entrez Gene ID:19165
Ensembl ID:ENSMUSG00000010609

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H4|1 101.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 180227449 - 180245760

 Exon Info From UCSC:
NM_011183
NM_001128605

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4038761Full LengthBC010403presenilin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035313  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001128605 NP_001122077    
NM_011183 NP_035313   Presenilin

Related Sequences

 
mRNAGenPeptSwissProt
AF038935 AAB92660 Q61144
U49111 AAC52935 Q61144
U57324 AAC52937 Q61144
U57325 AAC53311 Q61144
BC010403 AAH10403 Q61144
Q3U4P5
AY864737 AAW81051 Q5EM20
AK014706 BAB29514 Q61144
AK148111 BAE28350 Q3U4P5
AK154119 BAE32386 Q3U4P5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Psen2 NP_001122077 R.norvegicus Psen2 81751   NP_112349 97
H.sapiens PSEN2 5664 Gene Info NP_036618 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta