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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atp9a, ATPase, class II, type 9A
Sequence ID:NM_015731
Entrez Gene ID:11981
Ensembl ID:ENSMUSG00000027546

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 168634464 - 168741962

 Exon Info From UCSC:
NM_015731

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6813369Full LengthBC094551ATPase, class II, type 9A
3603550IncompleteBC006949ATPase, class II, type 9A
6515678IncompleteBC075718ATPase, class II, type 9A

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_015731 NP_056546 O70228 EC 3.6.3.1  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF011336 AAC05245 O70228 EC 3.6.3.1
AF152243 AAF08396 O70228 EC 3.6.3.1
BC006949 AAH06949 O70228 EC 3.6.3.1
BC021814 AAH21814 O70228 EC 3.6.3.1
BC075718 AAH75718 Q6DI68  
BC094551 AAH94551 Q505G9  
AK082271 BAC38451 Q8C4G3  
AK089064 BAC40730 Q8C288  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp9a NP_056546 H.sapiens ATP9A 10079 Gene Info NP_006036 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)