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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tgm2, transglutaminase 2, C polypeptide
Sequence ID:NM_009373
Entrez Gene ID:21817
Ensembl ID:ENSMUSG00000037820

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H1|2 89.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 158117799 - 158146306

 Exon Info From UCSC:
NM_009373

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3256943Full LengthBC016492transglutaminase 2, C polypeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033399  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_009373 NP_033399 P21981 EC 2.3.2.13 Transglut_N
Transglut_C
Transglut_core

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M55154 AAA40420 P21981 EC 2.3.2.13
AF076928 AAC62014 P21981 EC 2.3.2.13
AF114266 AAD37501 P21981 EC 2.3.2.13
BC016492 AAH16492 P21981 EC 2.3.2.13
AK052912 BAC35200 P21981 EC 2.3.2.13
AK080224 BAC37852 P21981 EC 2.3.2.13
AK080593 BAC37952 P21981 EC 2.3.2.13
AK089481 BAC40899 P21981 EC 2.3.2.13
AK143712 BAE25511 P21981 EC 2.3.2.13
AK151776 BAE30682 P21981 EC 2.3.2.13
AK152152 BAE30987 P21981 EC 2.3.2.13
AK152627 BAE31370 P21981 EC 2.3.2.13
AK159255 BAE34936 P21981 EC 2.3.2.13
AK166302 BAE38690 P21981 EC 2.3.2.13
AK168990 BAE40790 P21981 EC 2.3.2.13
AK169356 BAE41105 P21981 EC 2.3.2.13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tgm2 NP_033399 R.norvegicus Tgm2 56083   NP_062259 96
H.sapiens TGM2 7052 Gene Info NP_004604 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta