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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Asxl1, additional sex combs like 1
Sequence ID:NM_001039939
Entrez Gene ID:228790
Ensembl ID:ENSMUSG00000042548

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H1|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 153401282 - 153403036

 Exon Info From UCSC:
NM_001039939

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069533Full LengthBC172725additional sex combs like 1 (Drosophila)
100069420BC172612additional sex combs like 1 (Drosophila)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001039939 NP_001035028 P59598  

Related Sequences

 
mRNAGenPeptSwissProt
BC172612 AAI72612 P59598
BC172725 AAI72725  
AK122413 BAC65695 P59598
AK133095 BAE21508 Q3V0J6
BK005683 DAA05751 Q24JP2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Asxl1 NP_001035028 R.norvegicus RGD1561878 311553   XP_002729264 89
H.sapiens ASXL1 171023 Gene Info NP_056153 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)