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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Apcs, serum amyloid P-component
Sequence ID:NM_011318
Entrez Gene ID:20219
Ensembl ID:ENSMUSG00000026542

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H3|1 94.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 172893961 - 172894940

NM_011318 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30308397Full LengthBC061125serum amyloid P-component

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035448  

Protein Infomation

NM_011318 NP_035448 P12246 Pentaxin

Related Sequences

M23248 AAA40091 P12246
M23552 AAA40092 P12246
BC061125 AAH61125 P12246
AK144248 BAE25796 P12246
AK165699 BAE38344 P12246
X14079 CAA32243 P12246
Y00426 CAA68488 P12246

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Apcs NP_035448 R.norvegicus Apcs 29339   NP_058866 81
H.sapiens APCS 325 Gene Info NP_001630 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)