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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Smap1, stromal membrane-associated protein 1
Sequence ID:NM_028534
Entrez Gene ID:98366
Ensembl ID:ENSMUSG00000026155

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 A5|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 23846295 - 23909689

NM_028534 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19372385246523853401
93812452385510223855409
124614112385614123856306
141215392386026123860388
154016302386586123865951
163117112387305523873135
171217872388321223883287
178818732388454723884632
187420072389869823898831
200822592392887623929127

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2810817Full LengthBC006946stromal membrane-associated protein 1
6404319IncompleteBC080286stromal membrane-associated protein 1
30136530IncompleteBC100537stromal membrane-associated protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082810  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028534 NP_082810 Q91VZ6 ArfGap

Related Sequences

 
mRNAGenPeptSwissProt
BC006946 AAH06946 Q91VZ6
BC080286 AAH80286 Q91VZ6
BC100537 AAI00538 Q91VZ6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smap1 NP_082810 H.sapiens SMAP1 60682 Gene Info NP_001037770 93
D.melanogaster CG8243 35890   NP_610424 51
A.thaliana AGD5 835519   NP_568807 49
A.gambiae AgaP_AGAP012088 1280585   XP_320438 41
C.elegans W09D10.1 176499   NP_499364 39
A.gambiae AgaP_AGAP012887 4397895   XP_001230274 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)