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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ms4a2, membrane-spanning 4-domains, subfamily A, member 2
Sequence ID:NM_013516
Entrez Gene ID:14126
Ensembl ID:ENSMUSG00000024680

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19 8.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 11616956 - 11623719

NM_013516 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13791169168211692060
3804781169290511693003
4796341169334311693498
6356911169410611694162
6928261169653211696666
8279261169717211697271
92710101169804911698132

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862345Full LengthBC139323membrane-spanning 4-domains, subfamily A, member 2
8862346Full LengthBC139324membrane-spanning 4-domains, subfamily A, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038544  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013516 NP_038544 P20490 CD20

Related Sequences

 
mRNAGenPeptSwissProt
J05019 AAA37601 P20490
U90218 AAB49986  
BC139323 AAI39324 B2RTF7
BC139324 AAI39325 B2RTF7
AK144021 BAE25661 Q3UNT6
AK161121 BAE36202  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ms4a2 NP_038544 R.norvegicus Ms4a2 25316   NP_036977 83
H.sapiens MS4A2 2206 Gene Info NP_000130 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta