Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rc3h1, RING CCCH (C3H) domains 1
Sequence ID:NM_001024952
Entrez Gene ID:381305
Ensembl ID:ENSMUSG00000040423

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H2.1|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 160972944 - 160974973

 Exon Info From UCSC:
NM_001024952

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861684Full LengthBC138663RING CCCH (C3H) domains 1
100016158BC152931RING CCCH (C3H) domains 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001020123  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001024952 NP_001020123 Q4VGL6 zf-C3HC4
zf-CCCH

Related Sequences

 
mRNAGenPeptSwissProt
BC138663 AAI38664 Q4VGL6
BC152931 AAI52932  
AY948287 AAY16368 Q4VGL6
AK173335 BAD32613 Q4VGL6
AK139648 BAE24092 Q3UT88
AK162212 BAE36793 Q3TS82

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rc3h1 NP_001020123 R.norvegicus Rc3h1 680586   XP_001057889 96
H.sapiens RC3H1 149041 Gene Info NP_742068 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)