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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Snx15, Sorting nexin 15
Sequence ID:NM_026912
Entrez Gene ID:69024
Ensembl ID:ENSMUSG00000024787

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 6119402 - 6121428

NM_026912 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1456461194036119953
56582261204856120742
82396661213786121521
967111461217826121929
1115123061220396122154
1231135161238296123949
1352138761241526124187
1388155461280486128214

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4503873Full LengthBC016091sorting nexin 15

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081188  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026912 NP_081188 Q91WE1 PX
MIT

Related Sequences

 
mRNAGenPeptSwissProt
BC016091 AAH16091 Q91WE1
AK005338 BAB23960 Q9CW22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Snx15 NP_081188 R.norvegicus Snx15 293691   NP_001019923 96
H.sapiens SNX15 29907 Gene Info NP_037438 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)