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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Nfatc1, nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
Sequence ID:NM_001164109
NM_001164110
NM_001164111
NM_001164112
NM_016791
NM_198429
Entrez Gene ID:18018
Ensembl ID:ENSMUSG00000033016

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E4|18 54.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 80648458 - 80708124

 Exon Info From UCSC:
NM_001164109
NM_001164110
NM_001164111
NM_001164112
NM_016791
NM_198429

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5354603Full LengthBC061509nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058071  NP_940821  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164109 NP_001157581    
NM_001164110 NP_001157582    
NM_001164111 NP_001157583    
NM_001164112 NP_001157584    
NM_016791 NP_058071 Q9DBQ6 RHD
TIG
NM_198429 NP_940821 Q6P7T9 RHD
TIG

Related Sequences

 
mRNAGenPeptSwissProt
AF049606 AAC05505 O88942
AF087434 AAC36725 O88942
AF239169 AAF40225 Q9JHD3
BC061509 AAH61509 Q6P7T9
EU887567 ACG55587 B5B2N2
EU887568 ACG55588 Q6P7T9
EU887569 ACG55589 B5B2N4
EU887570 ACG55590 B5B2N5
EU887571 ACG55591 Q9DBQ6
EU887572 ACG55592 B5B2N7
AK004810 BAB23581 Q9DBQ6
AK144965 BAE26158 Q3UME0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nfatc1 NP_001157582 R.norvegicus Nfatc1 100361818   XP_002728613 94
H.sapiens NFATC1 4772 Gene Info NP_765975 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta