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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Etf1, eukaryotic translation termination factor 1
Sequence ID:NM_144866
Entrez Gene ID:225363
Ensembl ID:ENSMUSG00000024360

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 B1|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 34929397 - 34931905

 Exon Info From UCSC:
NM_144866

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3992883Full LengthBC013717eukaryotic translation termination factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_659115  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_144866 NP_659115   eRF1_1
eRF1_2
eRF1_3

Related Sequences

 
mRNAGenPeptSwissProt
BC013717 AAH13717 Q8BWY3
D87691 BAA13439 P70199
AK049607 BAC33839 Q8BWY3
AK152428 BAE31210 Q3U6V5
AK152952 BAE31619 Q3U6V5
AK164020 BAE37589 Q8BWY3
AK166740 BAE38983 Q3TL10
AK169345 BAE41096 Q3TF02
AK170221 BAE41644 Q3TDF8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Etf1 NP_659115 H.sapiens ETF1 2107 Gene Info NP_004721 100
R.norvegicus Etf1 307503   NP_001008345 100
D.melanogaster eRF1 40240   NP_788547 86
A.gambiae AgaP_AGAP010310 1279737   XP_319502 86
C.elegans T05H4.6 179028   NP_001024107 79
N.crassa NCU00410 3873443   XP_957296 75
A.thaliana ERF1-1 834839   NP_001032029 72
S.cerevisiae SUP45 852440   NP_009701 69
S.pombe sup45 2542148   NP_594680 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)