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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Chst9, carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
Sequence ID:NM_199055
Entrez Gene ID:71367
Ensembl ID:ENSMUSG00000047161

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 A1|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 15452174 - 15718046

NM_199055 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
111531561068315611835
115411911565379815653835
119212301577219015772228
123113691587641615876554

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40056052Full LengthBC107361carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_951010  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_199055 NP_951010 Q76EC5 Sulfotransfer_2

Related Sequences

 
mRNAGenPeptSwissProt
BC107361 AAI07362 Q3KNB9
AB106879 BAC87754 Q76EC5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chst9 NP_951010 R.norvegicus Chst9 291770   NP_001163941 92
H.sapiens CHST9 83539 Gene Info NP_113610 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)