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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Col19a1, collagen, type XIX, alpha 1
Sequence ID:NM_007733
Entrez Gene ID:12823
Ensembl ID:ENSMUSG00000026141

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1|1 A3

Chromosomal Position (from UCSC)

Chromosomal Position:1: 24263993 - 24587411

 Exon Info From UCSC:
NM_007733

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40097873Full LengthBC118970collagen, type XIX, alpha 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031759  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007733 NP_031759 Q0VF58 Collagen

Related Sequences

 
mRNAGenPeptSwissProt
BC118970 AAI18971 Q0VF58
AB000636 BAA23578 Q0VF58
XM_001474756 XP_001474806  
XM_001476845 XP_001476895  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Col19a1 NP_031759 R.norvegicus Col19a1 367236   XP_002730058 93
H.sapiens COL19A1 1310 Gene Info NP_001849 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)