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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Eda, ectodysplasin-A
Sequence ID:NM_001177937
NM_001177938
NM_001177939
NM_001177940
NM_001177941
NM_001177942
NM_001177943
NM_001177944
NM_010099
Entrez Gene ID:13607
Ensembl ID:ENSMUSG00000059327

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X C3|X 37.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 99975657 - 100397539

 Exon Info From UCSC:
NM_001177937
NM_001177938
NM_001177939
NM_001177940
NM_001177941
NM_001177942
NM_001177943
NM_001177944
NM_010099

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053338Full LengthBC144790ectodysplasin-A
9053339Full LengthBC144791ectodysplasin-A
40129902Full LengthBC125387ectodysplasin-A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034229  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177937 NP_001171408    
NM_001177938 NP_001171409    
NM_001177939 NP_001171410    
NM_001177940 NP_001171411    
NM_001177941 NP_001171412    
NM_001177942 NP_001171413    
NM_001177943 NP_001171414    
NM_001177944 NP_001171415    
NM_010099 NP_034229 Q3UV69
O54693
TNF
Collagen

Related Sequences

 
mRNAGenPeptSwissProt
AF004435 AAB88122 O54693
AF016627 AAB95202 O54693
AF016628 AAB95203 Q3UV69
O54693
AF016629 AAB95204 Q3UV69
O54693
AF016630 AAB95205 O54693
AF016631 AAB95206 O54693
BC125387 AAI25388 Q3UV69
BC144790 AAI44791 Q1L2E0
BC144791 AAI44792 O54693
DQ168876 ABB59616 Q3UV69
DQ168877 ABB59617 Q1L2E0
DQ168878 ABB59618 Q1L2D9
DQ168879 ABB59619 Q1L2D8
DQ168880 ABB59620 Q1L2D6
DQ168881 ABB59621 Q1L2D6
AK137551 BAE23404 Q3UV69
O54693
AJ243657 CAB52696 O54693
AJ243658 CAB52697 O54693

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Eda NP_034229 R.norvegicus Eda 302424   XP_228582 100
H.sapiens EDA 1896 Gene Info NP_001005612 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)