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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. 2010005H15Rik, RIKEN cDNA 2010005H15 gene
Sequence ID:NM_029733
Entrez Gene ID:76770

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 B3|16

Chromosomal Position (from UCSC)

Chromosomal Position:16: 36221467 - 36257444

NM_029733 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1853622164736221731
861473623890936238970
1482453625309936253196
2463473625562636255727
3485283625733236257512

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053817Full LengthBC145264RIKEN cDNA 2010005H15 gene
40129911Full LengthBC125396RIKEN cDNA 2010005H15 gene
40129937Full LengthBC125422RIKEN cDNA 2010005H15 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084009  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_029733 NP_084009 Q9D8D6 Cystatin

Related Sequences

 
mRNAGenPeptSwissProt
BC125396 AAI25397 Q9D8D6
BC125422 AAI25423 Q9D8D6
BC145264 AAI45265 Q9D8D6
AK008122 BAB25476 Q9D8D6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus 2010005H15Rik NP_084009 M.musculus Gm5483 433016 Gene Info NP_001076016 97
M.musculus Csta 209294 Gene Info NP_001028411 75
R.norvegicus Csta 288067   NP_001099346 73
H.sapiens CSTA 1475 Gene Info NP_005204 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)