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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ldb1, LIM domain binding 1
Sequence ID:NM_001113408
NM_010697
Entrez Gene ID:16825
Ensembl ID:ENSMUSG00000025223

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 C3|19 46.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 46033110 - 46036287

 Exon Info From UCSC:
NM_001113408
NM_010697

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3708169Full LengthBC013624LIM domain binding 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034827  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001113408 NP_001106879 P70662  
NM_010697 NP_034827 P70662 LIM_bind

Related Sequences

 
mRNAGenPeptSwissProt
AF030333 AAB94131 P70662
U89488 AAB96885 P70662
U69270 AAC52887 P70662
U70375 AAC52933 P70662
BC013624 AAH13624 P70662
AB250383 BAE95401 P70662

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ldb1 NP_001106879 R.norvegicus Ldb1 309447   NP_001101071 100
H.sapiens LDB1 8861 Gene Info NP_001106878 100
C.elegans ldb-1 181292   NP_509846 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta