Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Opn3, opsin 3
Sequence ID:NM_010098
Entrez Gene ID:13603
Ensembl ID:ENSMUSG00000026525

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1|1 H3

Chromosomal Position (from UCSC)

Chromosomal Position:1: 175662427 - 175692590

NM_010098 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2728177592558177593284
729980177593657177593908
9811300177595440177595759
13011721177622300177622720

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062735Full LengthBC156916opsin 3
40046181IncompleteBC105646opsin 3
40046183IncompleteBC105919opsin 3
40046185IncompleteBC139805opsin 3
100062327BC156120opsin 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034228  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010098 NP_034228 Q9WUK7 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
AF140241 AAD32670 Q9WUK7
BC104486 AAI04487 Q3SX53
BC105646 AAI05647 Q3KR48
BC105919 AAI05920 Q3KR48
BC139805 AAI39806 Q3KR48
BC156120 AAI56121  
BC156916 AAI56917  
AK043135 BAC31471 Q9WUK7
AK132822 BAE21380 Q9WUK7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Opn3 NP_034228 R.norvegicus Opn3 498289   XP_573517 98
H.sapiens OPN3 23596 Gene Info NP_055137 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)