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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Defa20, defensin, alpha, 20
Sequence ID:NM_183268
Entrez Gene ID:68009
Ensembl ID:ENSMUSG00000095066

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 A2|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 21378516 - 21379492

NM_183268 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12172261972722619943
2184272262049922620708

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100066279Full LengthBC165979defensin related cryptdin 20

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_899091  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001270555 NP_001257484    
NM_183268 NP_899091 Q8C1N9 Defensin_propep

Related Sequences

 
mRNAGenPeptSwissProt
BC165979 AAI65979  
AY746425 AAW78334 Q8C1N9
DQ103703 AAZ17407 Q45VN2
AK008107 BAC25200 Q8BH68
AK008275 BAC25212 Q8BH68
AK008377 BAC25218 Q8C1P0
AK008459 BAC25221 Q8C1N9
XM_003086903 XP_003086951  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Defa20 NP_899091 M.musculus Gm15308 100041890 Gene Info NP_001170992 100
M.musculus Defa22 382059 Gene Info NP_997541 84
M.musculus Defa21 66298 Gene Info NP_899076 82
M.musculus Defa3 13237 Gene Info NP_031876 81
M.musculus Defa17 23855 Gene Info NP_001161262 81
M.musculus Defa24 503491   NP_001019396 80
M.musculus Gm15284 100038927   NP_001170956 80
M.musculus Defa26 626708 Gene Info NP_001073402 79
M.musculus Defa-rs7 13226 Gene Info NP_031874 79
M.musculus Gm15315 100041952   NP_001170999 79
M.musculus Defa23 497114 Gene Info NP_001012307 79
M.musculus Defa5 13239 Gene Info NP_031877 76
M.musculus Gm10104 100041688 Gene Info NP_001170952 76
M.musculus Gm14850 100041895 Gene Info NP_001170993 76
M.musculus Defa25 13236 Gene Info NP_031875 75
M.musculus Gm15293 100041759 Gene Info NP_001170957 75
M.musculus Gm15292 100041787 Gene Info NP_001170958 75
M.musculus Gm15299 100041811 Gene Info NP_001164426 74
M.musculus Gm6696 626682 Gene Info NP_001170994 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)