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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gpr39, G protein-coupled receptor 39
Sequence ID:NM_027677
Entrez Gene ID:71111
Ensembl ID:ENSMUSG00000026343

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1|1 E3

Chromosomal Position (from UCSC)

Chromosomal Position:1: 125840002 - 125873173

NM_027677 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11197127573572127574768
11982687127768946127770435

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30745457Full LengthBC085285G protein-coupled receptor 39

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027677 NP_081953    

Related Sequences

 
mRNAGenPeptSwissProt
BC085285 AAH85285 Q5U431
AY255549 AAO85061 Q5U431
EU076431 ABU53901 A6QR71
AK016817 BAB30446 Q9D442
BK005608 DAA06054 A6QR71

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gpr39 NP_081953 R.norvegicus Gpr39 288995   NP_001107864 93
H.sapiens GPR39 2863 Gene Info NP_001499 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)