Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sc5d, sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)
Sequence ID:NM_172769
Entrez Gene ID:235293
Ensembl ID:ENSMUSG00000032018

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 B

Chromosomal Position (from UCSC)

Chromosomal Position:9: 42254731 - 42264200

NM_172769 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
116214206225942063879
162217224206418942064289
172318554206666342066795
185620734206776442067981
207421544207013342070213
215522494207228842072382

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5101986Full LengthBC024132sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766357  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_172769 NP_766357 Q8BGI0   Sterol_desat

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC024132 AAH24132 Q8R1S3  
AB016248 BAA33730 O88822 EC 1.14.21.6
AK043825 BAC31666 Q8BGI0  
AK077670 BAC36944 Q8BGI0  
AK154309 BAE32506 Q8R1S3  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sc5d NP_766357 R.norvegicus Sc5dl 114100   NP_446094 95
H.sapiens SC5DL 6309 Gene Info NP_001020127 84
S.pombe erg3 2542109   NP_593135 55
N.crassa NCU06207 3879071   XP_962923 54
S.cerevisiae ERG3 850745   NP_013157 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)