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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Chrnb4, cholinergic receptor, nicotinic, beta polypeptide 4
Sequence ID:NM_148944
Entrez Gene ID:108015
Ensembl ID:ENSMUSG00000035200

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 B|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 55034804 - 55035632

NM_148944 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
120905487596254878051
209130815488244854883438
308231915488419854884307
319232365488439354884437
323733855489158354891731
338634865489625054896350

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861873Full LengthBC138851cholinergic receptor, nicotinic, beta polypeptide 4
100062851Full LengthBC157005cholinergic receptor, nicotinic, beta polypeptide 4
100061568BC156231cholinergic receptor, nicotinic, beta polypeptide 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_683746  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_148944 NP_683746 Q8R493
Q3USV2
Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
BC138851 AAI38852 Q3USV2
BC156231 AAI56232  
BC157005 AAI57006  
AF325351 AAL37367 Q8R493
AF492840 AAM11659 Q8R493
Q3USV2
AY574269 AAS90365 Q8R493
Q3USV2
AK140071 BAE24228 Q8R493
Q3USV2
AK160561 BAE35875 Q3TUU6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chrnb4 NP_683746 R.norvegicus Chrnb4 25103   NP_434693 97
H.sapiens CHRNB4 1143 Gene Info NP_000741 84
A.gambiae AgaP_AGAP002971 1272992   XP_311925 47
D.melanogaster nAcRbeta-96A 42920   NP_524483 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)