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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cnih, cornichon homolog (Drosophila)
Sequence ID:NM_009919
Entrez Gene ID:12793
Ensembl ID:ENSMUSG00000015759

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14 C1|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 46775669 - 46788338

NM_009919 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19834739524147396223
98411274739856347398706
112812404739978747399899
124113094740378647403854
131014844740785747408031

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2938052Full LengthBC034868cornichon homolog (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034049  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009919 NP_034049 O35372 Cornichon

Related Sequences

 
mRNAGenPeptSwissProt
AF022811 AAC15828 O35372
BC034868 AAH34868 O35372
AK002293 BAB21993 O35372
AK011200 BAB27463 O35372
AK152432 BAE31214 O35372
AK154479 BAE32615 Q3U420
AK168154 BAE40119 Q3THS7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cnih NP_034049 H.sapiens CNIH 10175 Gene Info NP_005767 100
R.norvegicus Cnih 289994   NP_001099499 100
A.gambiae AgaP_AGAP008974 1279936   XP_319722 69
D.melanogaster cni 34967   NP_477068 67
C.elegans T09E8.3 179801   NP_506278 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)