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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Smad6, SMAD family member 6
Sequence ID:NM_008542
Entrez Gene ID:17130
Ensembl ID:ENSMUSG00000036867

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 D

Chromosomal Position (from UCSC)

Chromosomal Position:9: 63953525 - 64021024

NM_008542 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
29816380088363801862
98210596385533763855414
106011166386002163860077
111729716386801163869865

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6477199Full LengthBC047280MAD homolog 6 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032568  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008542 NP_032568 Q80ZV9
O35182
MH1
MH2

Related Sequences

 
mRNAGenPeptSwissProt
AF010133 AAB81351 O35182
BC047280 AAH47280 Q80ZV9
AK004671 BAB23460 O35182

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smad6 NP_032568 R.norvegicus Smad6 367100   NP_001102472 98
H.sapiens SMAD6 4091 Gene Info NP_005576 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)