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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cd209a, CD209a antigen
Sequence ID:NM_133238
Entrez Gene ID:170786
Ensembl ID:ENSMUSG00000031494

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 A1.1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 3743399 - 3748930

NM_133238 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
184037433943744233
84195037455033745612
951110237468803747031
1103118337476303747710
1184127337483233748412
1274136037486723748758
1361148437488603748983

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40040036Full LengthBC111095CD209a antigen

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_573501  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_133238 NP_573501 Q91ZX1 Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC111095 AAI11096 Q2TA59
AY049062 AAK85825 Q91ZX1
AF373408 AAL13234 Q91ZX1
AF374470 AAL27539 Q91ZX1
AK054139 BAC35667 Q91ZX1
AK171639 BAE42579 Q91ZX1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cd209a NP_573501 R.norvegicus Cd209a 288375   NP_001099374 86
H.sapiens CLEC4M 10332 Gene Info NP_055072 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)