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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Trpc6, transient receptor potential cation channel, subfamily C, member 6
Sequence ID:NM_013838
Entrez Gene ID:22068
Ensembl ID:ENSMUSG00000031997

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A1|9 1.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 8604747 - 8680732

 Exon Info From UCSC:
NM_013838

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9055743Full LengthBC141131transient receptor potential cation channel, subfamily C, member 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038866  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013838 NP_038866 Q61143 Ank
Ion_trans
TRP_2

Related Sequences

 
mRNAGenPeptSwissProt
U49069 AAC06146 Q61143
AF057748 AAC64394 Q61143
BC067391 AAH67391 Q6NV56
BC068310 AAH68310 Q6NV56
BC141131 AAI41132 Q61143
AK133864 BAE21896 Q3UZG1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Trpc6 NP_038866 R.norvegicus Trpc6 89823   NP_446011 98
H.sapiens TRPC6 7225 Gene Info NP_004612 94
C.elegans trp-1 176202   NP_001040889 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)