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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Stc2, stanniocalcin 2
Sequence ID:NM_011491
Entrez Gene ID:20856
Ensembl ID:ENSMUSG00000020303

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A4|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 31359440 - 31370061

NM_011491 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
110883125944031260527
108913003126533131265542
130114433126772531267867
144417933126971131270060

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3665803Full LengthBC012206stanniocalcin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035621  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011491 NP_035621 Q5SS12
O88452
Stanniocalcin

Related Sequences

 
mRNAGenPeptSwissProt
AF056244 AAC27507 Q5SS12
O88452
AF031035 AAD01921 Q5SS12
O88452
BC012206 AAH12206 Q5SS12
O88452
AK002527 BAB22164 Q9DCS6
AK010318 BAB26849 Q5SS12
O88452

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Stc2 NP_035621 R.norvegicus Stc2 63878   NP_071566 97
H.sapiens STC2 8614 Gene Info NP_003705 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)