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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tgfb1i1, transforming growth factor beta 1 induced transcript 1
Sequence ID:NM_009365
Entrez Gene ID:21804
Ensembl ID:ENSMUSG00000030782

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7|7 F1-F3

Chromosomal Position (from UCSC)

Chromosomal Position:7: 128246977 - 128253598

NM_009365 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11422135390384135391805
14231475135391933135391985
14761618135392091135392233
16191706135392400135392487
17071812135392603135392708
18132007135392813135393007
20082181135395590135395763
21822263135395991135396072
22642412135396297135396445
24133026135396612135397225

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3489459Full LengthBC002049transforming growth factor beta 1 induced transcript 1
6816930Full LengthBC056362transforming growth factor beta 1 induced transcript 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033391  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009365 NP_033391 Q62219 LIM

Related Sequences

 
mRNAGenPeptSwissProt
L22482 AAA62226 Q62219
BC002049 AAH02049 Q62219
BC056362 AAH56362 Q62219
DQ143891 AAZ82195 Q62219
DQ143892 AAZ82196 Q62219
DQ143893 AAZ82197 Q62219
DQ143894 AAZ82198 Q62219
DQ143895 AAZ82199 Q62219
DQ143896 AAZ82200 Q62219
DQ143897 AAZ82201 Q62219
DQ143898 AAZ82202 Q62219
DQ143899 AAZ82203 Q62219
DQ143900 AAZ82204 Q62219
AK156423 BAE33707 Q62219
AK158409 BAE34493 Q62219

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tgfb1i1 NP_033391 R.norvegicus Tgfb1i1 84574   XP_341935 98
H.sapiens TGFB1I1 7041 Gene Info NP_001035919 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)