Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. A4galt, Alpha 1,4-galactosyltransferase
Sequence ID:NM_001170954
NM_001004150
Entrez Gene ID:239559
Ensembl ID:ENSMUSG00000047878

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E1|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 83226733 - 83251774

 Exon Info From UCSC:
NM_001170954
NM_001004150

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861866Full LengthBC138844alpha 1,4-galactosyltransferase
8861867Full LengthBC138845alpha 1,4-galactosyltransferase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001004150  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001004150 NP_001004150 Q3UF00
Q67BJ4
EC 2.4.1.228 Gly_transf_sug
Gb3_synth
NM_001170954 NP_001164425      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC138844 AAI38845 Q3UF00  
BC138845 AAI38846 Q3UF00  
AY371179 AAR18365 Q3UF00
Q67BJ4
EC 2.4.1.228
DQ143885 ABA25853 Q0R0H6  
AK149186 BAE28761 Q3UF00
Q67BJ4
EC 2.4.1.228
AK162529 BAE36956 Q3TRS1  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus A4galt NP_001004150 R.norvegicus A4galt 63888   NP_071576 92
H.sapiens A4GALT 53947 Gene Info NP_059132 78
A.gambiae AgaP_AGAP008259 4578099   XP_001237894 37
A.gambiae AgaP_AGAP008258 1277725   XP_317211 37
D.melanogaster alpha4GT1 33512   NP_608737 37
A.gambiae AgaP_AGAP008260 3291688   XP_555205 36
D.melanogaster alpha4GT2 43124   NP_651434 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)