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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Irf7, interferon regulatory factor 7
Sequence ID:NM_001252600
NM_001252601
NM_016850
Entrez Gene ID:54123
Ensembl ID:ENSMUSG00000025498

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F5|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 141263183 - 141266423

Transcript StartTranscript EndChromosomal Start Chromosomal End
1192148449087148449278
193311148449354148449472
312701148449557148449946
702794148450121148450213
795957148450391148450553
9581016148450623148450681
10171233148450973148451189
12341396148451275148451437
13971818148451521148451942
18191830148452288148452299

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861821Full LengthBC138799interferon regulatory factor 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058546  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252600 NP_001239529    
NM_001252601 NP_001239530    
NM_016850 NP_058546 Q542T3
P70434
IRF

Related Sequences

 
mRNAGenPeptSwissProt
U73037 AAB18626 Q542T3
P70434
BC138799 AAI38800 Q542T3
AK079685 BAC37723 Q542T3
P70434
AK150403 BAE29529 Q542T3
P70434
AK150608 BAE29699 Q542T3
P70434
AK152401 BAE31189 Q542T3
P70434
AK152403 BAE31191 Q3TW14
AK153054 BAE31680 Q542T3
P70434
AK159883 BAE35453 Q3TW14

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Irf7 NP_058546 R.norvegicus Irf7 293624   NP_001028863 90
H.sapiens IRF7 3665 Gene Info NP_001563 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)