Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Exosc4, exosome component 4
Sequence ID:NM_175399
Entrez Gene ID:109075
Ensembl ID:ENSMUSG00000034259

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 D3|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 76326016 - 76327533

NM_175399 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12677615782676158092
2684747615945976159665
47517897615978576161099

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4007125Full LengthBC012277exosome component 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_780608  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175399 NP_780608 Q542B0
Q921I9
RNase_PH
RNase_PH_C

Related Sequences

 
mRNAGenPeptSwissProt
BC012277 AAH12277 Q542B0
Q921I9
AK089890 BAC40987 Q542B0
Q921I9
AK144062 BAE25679 Q542B0
Q921I9
AK167629 BAE39680 Q542B0
Q921I9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Exosc4 NP_780608 R.norvegicus Exosc4 300045   NP_001128332 98
H.sapiens EXOSC4 54512 Gene Info NP_061910 96
D.melanogaster Ski6 34721   NP_609618 55
A.thaliana RRP41 825335   NP_191721 48
N.crassa NCU00812 3880523   XP_964355 45
C.elegans exos-4.1 178261   NP_001021274 44
S.pombe ski6 2543451   NP_594082 42
S.cerevisiae SKI6 853109   NP_011711 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)