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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Myocd, myocardin
Sequence ID:NM_145136
NM_146386
Entrez Gene ID:214384
Ensembl ID:ENSMUSG00000020542

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B3|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 65176570 - 65269941

 Exon Info From UCSC:
NM_145136
NM_146386

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9055893Full LengthBC141281myocardin
100068099Full LengthBC167199myocardin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_660118  NP_666498  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145136 NP_660118   SAP
NM_146386 NP_666498 Q8VIM5 SAP

Related Sequences

 
mRNAGenPeptSwissProt
BC141281 AAI41282 B9EJ16
BC167199 AAI67199  
AF384055 AAK71683 Q8VIM5
AF437877 AAL30892 Q5SS66
Q8VIM5
AY303755 AAQ63841 Q8VIM5
AK084700 BAC39258 Q8VIM5
AK140668 BAE24440 Q3US93
AK142216 BAE24980 Q8VIM5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Myocd NP_660118 R.norvegicus Myocd 246297   NP_872608 96
H.sapiens MYOCD 93649 Gene Info NP_705832 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)