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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Usf2, upstream transcription factor 2
Sequence ID:NM_011680
Entrez Gene ID:22282
Ensembl ID:ENSMUSG00000058239

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A2-B1|7 11.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 30946579 - 30956759

NM_011680 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
314223173026831731687
142315513173176931731897
155216463173198331732077
164717053173976231739820
170617933174012431740211
179419443174030831740458
194521453174081831741018
214622643174116731741285
226523113174140031741446
231224193174171431741821

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6440967Full LengthBC082995upstream transcription factor 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035810  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011680 NP_035810 Q64705 HLH

Related Sequences

 
mRNAGenPeptSwissProt
U01662 AAA20492 Q64705
U01663 AAA20493 Q64705
BC019729 AAH19729 Q64705
BC082995 AAH82995 Q64705
AK146871 BAE27494 Q64705

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Usf2 NP_035810 R.norvegicus Usf2 81817   NP_112401 100
H.sapiens USF2 7392 Gene Info NP_003358 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)