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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mbd2, methyl-CpG binding domain protein 2
Sequence ID:NM_010773
Entrez Gene ID:17191
Ensembl ID:ENSMUSG00000024513

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, soft tissue, spleen, stem cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E2|18 44.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 70568333 - 70626127

NM_010773 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16767072794570728620
6778367074030670740465
8379747075285670752993
97510657077621870776308
106612437077748970777666
124413827078223670782374
138318507078531770785784

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6399206Full LengthBC046607methyl-CpG binding domain protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034903  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010773 NP_034903 Q9Z2E1 MBD

Related Sequences

 
mRNAGenPeptSwissProt
AF072243 AAC68872 Q9Z2E1
AF072244 AAC68873 Q9Z2E0
AF072245 AAC68874 Q9Z2E1
BC046607 AAH46607 Q9Z2E1
AK082825 BAC38639 Q8BUR7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mbd2 NP_034903 R.norvegicus Mbd2 680172   NP_001108497 98
H.sapiens MBD2 8932 Gene Info NP_003918 97
A.gambiae AgaP_AGAP003982 1278800   XP_318432 52
D.melanogaster MBD-like 41151   NP_649907 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)