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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lrp6, low density lipoprotein receptor-related protein 6
Sequence ID:NM_008514
Entrez Gene ID:16974
Ensembl ID:ENSMUSG00000030201

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 G1|6 63.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 134450208 - 134566782

 Exon Info From UCSC:
NM_008514

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6409058Full LengthBC060704low density lipoprotein receptor-related protein 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032540  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008514 NP_032540 O88572 EGF
Ldl_recept_a
Ldl_recept_b

Related Sequences

 
mRNAGenPeptSwissProt
AF074265 AAC33007 O88572
BC060704 AAH60704 O88572
AK140796 BAE24482 Q3US54
AK162203 BAE36789 Q3TS86

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lrp6 NP_032540 R.norvegicus Lrp6 312781   NP_001101362 99
H.sapiens LRP6 4040 Gene Info NP_002327 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)