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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Wnt5b, wingless-related MMTV integration site 5B
Sequence ID:NM_001271757
NM_001271758
NM_009525
Entrez Gene ID:22419
Ensembl ID:ENSMUSG00000030170

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F1|6 56.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 119432533 - 119544318

Transcript StartTranscript EndChromosomal Start Chromosomal End
141339119382548119383873
13401632119390299119390591
16331880119396352119396599
18812017119398153119398289
20182384119493998119494364

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4211437Full LengthBC010775wingless-related MMTV integration site 5B
6438917Full LengthBC051406wingless-related MMTV integration site 5B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033551  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001271757 NP_001258686    
NM_001271758 NP_001258687    
NM_009525 NP_033551 P22726 wnt

Related Sequences

 
mRNAGenPeptSwissProt
M89799 AAA40568 P22726
BC010775 AAH10775 P22726
BC051406 AAH51406 P22726

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Wnt5b NP_033551 R.norvegicus Wnt5b 282582   NP_001093959 98
H.sapiens WNT5B 81029 Gene Info NP_110402 94
A.gambiae AgaP_AGAP010290 1279717   XP_319487 54
D.melanogaster Wnt5 32838   NP_476924 50
C.elegans cwn-2 177870   NP_501822 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)