Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. C1qtnf9, C1q and tumor necrosis factor related protein 9
Sequence ID:NM_183175
Entrez Gene ID:239126
Ensembl ID:ENSMUSG00000071347

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 D1|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 60779281 - 60780866

NM_183175 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1356138697061387004
362226139111261391298
2232856139586161395923
28619026139808861399704

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40102920Full LengthBC115632C1q and tumor necrosis factor related protein 9
40102924Full LengthBC115633C1q and tumor necrosis factor related protein 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_898998  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_183175 NP_898998 Q4ZJN1 C1q
Collagen

Related Sequences

 
mRNAGenPeptSwissProt
BC115632 AAI15633 Q4ZJN1
BC115633 AAI15634 Q4ZJN1
DQ002401 AAY21933 Q4ZJN1
AK033673 BAC28422 Q4ZJN1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus C1qtnf9 NP_898998 R.norvegicus C1qtnf9 364395   XP_344415 97
H.sapiens C1QTNF9 338872 Gene Info NP_848635 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)