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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Kdm2a, lysine (K)-specific demethylase 2A
Sequence ID:NM_001001984
Entrez Gene ID:225876
Ensembl ID:ENSMUSG00000054611

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 4394823 - 4396199

 Exon Info From UCSC:
NM_001001984

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6840591Full LengthBC076576F-box and leucine-rich repeat protein 11
5708345IncompleteBC057051F-box and leucine-rich repeat protein 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001001984  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001001984 NP_001001984   zf-CXXC
JmjC

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC057051 AAH57051 P59997 EC 1.14.11.27
BC076576 AAH76576 I6L9G0  
AK173084 BAD32362 P59997 EC 1.14.11.27
AK037157 BAE20506 P59997 EC 1.14.11.27
AK137104 BAE23237 Q3UVN2  
AK141779 BAE24832 P59997 EC 1.14.11.27
AK155866 BAE33470 P59997 EC 1.14.11.27

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kdm2a NP_001001984 R.norvegicus Kdm2a 361700   NP_001101985 99
H.sapiens KDM2A 22992 Gene Info NP_036440 97
A.gambiae AgaP_AGAP001895 1281229   XP_321169 51
D.melanogaster CG11033 41090   NP_649864 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)