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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Itga4, integrin alpha 4
Sequence ID:NM_010576
Entrez Gene ID:16401
Ensembl ID:ENSMUSG00000027009

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 C3|2 46.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 79255588 - 79326778

 Exon Info From UCSC:
NM_010576

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30093248Full LengthBC068313integrin alpha 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034706  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010576 NP_034706 Q6NV53 Integrin_alpha
FG-GAP
Integrin_alpha2

Related Sequences

 
mRNAGenPeptSwissProt
U97151 AAC05709 Q78E20
AF109136 AAC95388 Q792F9
BC068313 AAH68313 Q6NV53
AK051676 BAC34715 Q8BQ25
AK156015 BAE33546 Q3U1F2
AK156517 BAE33742 Q3U0V9
AK171822 BAE42681 Q3TAI7
X53176 CAA37316 Q00651

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Itga4 NP_034706 R.norvegicus Itga4 311144   NP_001101207 94
H.sapiens ITGA4 3676 Gene Info NP_000876 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta