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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Faf1, Fas-associated factor 1
Sequence ID:NM_007983
Entrez Gene ID:14084
Ensembl ID:ENSMUSG00000010517

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C6|4 52.7 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 109676693 - 109962041

 Exon Info From UCSC:
NM_007983

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30362116Full LengthBC065098Fas-associated factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032009  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007983 NP_032009 P54731 UBX

Related Sequences

 
mRNAGenPeptSwissProt
U39643 AAA92091 P54731
BC065098 AAH65098 P54731

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Faf1 NP_032009 R.norvegicus Faf1 140657   NP_569090 99
H.sapiens FAF1 11124 Gene Info NP_008982 96
A.gambiae AgaP_AGAP006473 1277080   XP_316513 40
D.melanogaster casp 36769   NP_995848 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta