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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Aplf, aprataxin and PNKP like factor
Sequence ID:NM_001170489
Entrez Gene ID:72103
Ensembl ID:ENSMUSG00000030051

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 D1|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 87629748 - 87672168

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3487226Full LengthBC002179aprataxin and PNKP like factor

Protein Infomation

NM_001170489 NP_001163960 Q9D842 EC  
NM_024251 NP_077213      

Related Sequences

BC002179 AAH02179 Q9D842 EC
AK008513 BAB25711 Q9D842 EC
AK034191 BAC28625 Q9D842 EC
AK078805 BAC37401 Q8BVD9  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Aplf NP_001163960 R.norvegicus Aplf 500247   XP_575597 83
H.sapiens APLF 200558 Gene Info NP_775816 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)