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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Polr1d, polymerase (RNA) I polypeptide D
Sequence ID:NM_009087
NM_181730
Entrez Gene ID:20018
Ensembl ID:ENSMUSG00000029642

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G3|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 147077578 - 147079080

 Exon Info From UCSC:
NM_009087
NM_181730

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3591169Full LengthBC002025polymerase (RNA) I polypeptide D
4987975Full LengthBC024394polymerase (RNA) I polypeptide D
6772717Full LengthBC087884polymerase (RNA) I polypeptide D

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033113  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009087 NP_033113 P97304
Q545W2
RNA_pol_L
NM_181730 NP_859419 Q9D1M1  

Related Sequences

 
mRNAGenPeptSwissProt
BC002025 AAH02025 Q99M44
BC024394 AAH24394 Q8R1M3
BC087884 AAH87884 Q9D1M1
D86609 BAA13139 P97304
Q545W2
AK002811 BAB22376 P97304
Q545W2
AK003353 BAB22731 Q9D1M1
AK154241 BAE32457 Q9D1M1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Polr1d NP_033113 H.sapiens POLR1D 51082 Gene Info NP_057056 90
S.pombe rpc19 2542799   NP_593118 58
N.crassa NCU00419 3873452   XP_957305 48
S.cerevisiae RPC19 855609   NP_014286 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta