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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lyn, Yamaguchi sarcoma viral (v-yes-1) oncogene homolog
Sequence ID:XM_003946126
NM_001111096
NM_010747
Entrez Gene ID:17096
Ensembl ID:ENSMUSG00000042228

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 A1|4 0.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 3678126 - 3791612

 Exon Info From UCSC:
NM_001111096
NM_010747

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3500419Full LengthBC003253Yamaguchi sarcoma viral (v-yes-1) oncogene homolog
3589207Full LengthBC031547Yamaguchi sarcoma viral (v-yes-1) oncogene homolog
9007404Full LengthBC157998Yamaguchi sarcoma viral (v-yes-1) oncogene homolog

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034877  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001111096 NP_001104566 P25911 EC 2.7.10.2  
NM_010747 NP_034877 Q8CEI0   SH2
SH3_1
Pkinase_Tyr

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M64608 AAA39470 P25911 EC 2.7.10.2
M57696 AAA39471 P25911 EC 2.7.10.2
M57697 AAA39472 P25911 EC 2.7.10.2
M33426 AAA40017 P25911 EC 2.7.10.2
BC003253 AAH03253 Q05DV0  
BC031547 AAH31547 Q3TCS3
P25911
EC 2.7.10.2
BC157998 AAI57999 Q3U6Q5  
AK028112 BAC25753 Q8CEI0  
AK152199 BAE31028 Q3TCS3
P25911
EC 2.7.10.2
AK153038 BAE31669 Q3U6Q5  
AK170561 BAE41882 Q3TCS3
P25911
EC 2.7.10.2
XM_003946126 XP_003946175    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lyn NP_001104566 R.norvegicus Lyn 81515   NP_110484 98
H.sapiens LYN 4067 Gene Info NP_002341 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta