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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Itga1, integrin alpha 1
Sequence ID:NM_001033228
Entrez Gene ID:109700
Ensembl ID:ENSMUSG00000042284

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 D2.2|13 65.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 115010578 - 115101878

 Exon Info From UCSC:
NM_001033228

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068137Full LengthBC167237integrin alpha 1
4234622IncompleteBC014765integrin alpha 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033228 NP_001028400 Q3V3R4  

Related Sequences

 
mRNAGenPeptSwissProt
BC014765 AAH14765 Q05DI0
BC167237 AAI67237 Q3V3R4
AK053377 BAC35370 Q8BPT3
AK035870 BAE20498 Q3V3R4
AK043769 BAE20643 Q3V391
AK141204 BAE24585 Q3URV2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Itga1 NP_001028400 R.norvegicus Itga1 25118   NP_112256 96
H.sapiens ITGA1 3672   NP_852478 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta