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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cd53, CD53 antigen
Sequence ID:NM_007651
Entrez Gene ID:12508
Ensembl ID:ENSMUSG00000040747

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F2.3|3 50.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 106758866 - 106760797

NM_007651 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12015106561778106563792
20162099106565010106565093
21002180106566129106566209
21812276106570244106570339
22772351106570843106570917
23522540106571715106571903
25412619106573599106573677
26202802106592884106593066

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5010267Full LengthBC021310CD53 antigen
30078163Full LengthBC052905CD53 antigen

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031677  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007651 NP_031677 Q61451
Q3U0W1
Tetraspannin

Related Sequences

 
mRNAGenPeptSwissProt
BC021310 AAH21310 Q61451
Q3U0W1
BC052905 AAH52905 Q61451
Q3U0W1
AK156510 BAE33740 Q61451
Q3U0W1
AK160326 BAE35739 Q3TV80
X97227 CAA65864 Q61451
Q3U0W1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cd53 NP_031677 R.norvegicus Cd53 24251   NP_036655 91
H.sapiens CD53 963 Gene Info NP_001035122 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)