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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pglyrp4, peptidoglycan recognition protein 4
Sequence ID:NM_001165968
NM_207263
Entrez Gene ID:384997
Ensembl ID:ENSMUSG00000042250

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F1|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 90738132 - 90741515

 Exon Info From UCSC:
NM_001165968
NM_207263

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053450Full LengthBC144902peptidoglycan recognition protein 4
40129763Full LengthBC120840peptidoglycan recognition protein 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_997146  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001165968 NP_001159440    
NM_207263 NP_997146 Q0VB07 Amidase_2

Related Sequences

 
mRNAGenPeptSwissProt
BC120840 AAI20841 Q0VB07
BC144902 AAI44903 B7ZMZ4
AY518699 AAS49173 Q0VB07

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pglyrp4 NP_001159440 R.norvegicus Pglyrp4 310611   XP_227383 89
H.sapiens PGLYRP4 57115 Gene Info NP_065126 76
D.melanogaster PGRP-LF 39064   NP_648299 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)