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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tcf7, transcription factor 7, T cell specific
Sequence ID:NM_009331
Entrez Gene ID:21414
Ensembl ID:ENSMUSG00000000782

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B1.3|11 28.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 52252603 - 52282571

NM_009331 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
113595206610552067463
136014085206975952069807
140915165207024152070348
151716795207045052070612
168017995207118552071304
180018925207235452072446
189319835207403252074122
198420955207501452075125
209622245209562352095751

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861616Full LengthBC138596transcription factor 7, T-cell specific
9053899Full LengthBC145343transcription factor 7, T-cell specific

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033357  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009331 NP_033357 Q80UF1 HMG_box
CTNNB1_binding

Related Sequences

 
mRNAGenPeptSwissProt
BC138596 AAI38597 Q80UF1
BC145343 AAI45344 B7ZNN3
AK037616 BAC29835 Q80UF1
AK038140 BAC29938 Q8CAQ6
X61385 CAA43658 Q00417
Q80UF1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tcf7 NP_033357 R.norvegicus Tcf7 363595   XP_343892 99
H.sapiens TCF7 6932 Gene Info NP_003193 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)