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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nlgn1, neuroligin 1
Sequence ID:NM_001163387
NM_138666
Entrez Gene ID:192167
Ensembl ID:ENSMUSG00000063887

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 A3|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 26331059 - 26332460

 Exon Info From UCSC:
NM_001163387
NM_138666

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30099449Full LengthBC098461neuroligin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_619607  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163387 NP_001156859    
NM_138666 NP_619607 Q99K10 COesterase

Related Sequences

 
mRNAGenPeptSwissProt
BC005523 AAH05523 Q99K10
BC098461 AAH98461 Q4KMN5
AK122433 BAC65715 Q99K10
AK138209 BAE23583 Q3UUP2
AK138367 BAE23634 Q3UUJ1
AK158813 BAE34679 Q3TY84
AK162384 BAE36885 Q3TRZ1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nlgn1 NP_001156859 R.norvegicus Nlgn1 116647   NP_446320 100
H.sapiens NLGN1 22871 Gene Info NP_055747 98
D.melanogaster neuroligin 33962   NP_523496 41
A.gambiae AgaP_AGAP002090 1281357   XP_320952 40
C.elegans nlg-1 181484   NP_510283 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)